Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954235.1_cds_XP_016493154.1_83292
CDS Infomation

[gene=LOC107812532] [db_xref=GeneID:107812532] [protein=premnaspirodiene oxygenase-like isoform X2] [protein_id=XP_016493154.1] [location=complement(join(21173..21796,22627..23298))] [gbkey=CDS]
Sequence

ATGCACTTAAAGCTCGGTCAACGTTTGGCAGTTGTAGTATCATCAGCAGAAGTTGTCAAA
GAGTTGTTGTCAACACATGACCTCACCTTTGCTAACAGGCCCCAACTTCTGGTCGGGAAA
ATAGTGTGGTACGATTTTTCTAACATTGTGTTTGCTCAATACGGTGATTTCTGGAGACAG
ATGCGCAAAATTTGCAACTCAGAACTCCTCGGGCAGAGGAAGATCCAGTCATTTTTTCCT
ATGATGTTTGACGAGGTGAGCAGTCTTGTTATGTCAATACAGGAACACGACATAGGAACA
CCGATAAACTTGAGTAAAAGACTAAGTTTAATGCAATTTGCCATCACTTGTAAAGCCGCT
GTTGGTAGGACTTATTCAGATCAGGAGACTTTGTTAATGGTTATGAGAGAAGTAGTGACA
TCCGCGGACATGTTCAGTCCCGAGGATCTTTTCCCTTCTATGAAAATACTTCAATTAATT
GGTGGATTAAAGAAAAAACTAACTAAGATGCATCAGAAGGCAGATCATGTCGTTGAAGAA
ATTATTCGTGAACATGAAATTAAAAGAGGAACGTCTGTCAAGCCAATAGAGGAAGATATC
GTCGATGTACTTCTGAGGCTTAAAGAGAGCCAAGATTTTCCAATTCCTATCACTAGGAAT
AATATCAAAGCGGATATGTTTGTTGCTGGAACTACAAGCACAACCACAGTCACAGAATGG
GCATTATCAGAGCTGGTAAGGAATCCGAGAATAATGAAGAAAGCACAAGCTGAAGTGAAA
CAAGTCTTCAAGTTTGGAACAGAAAGAATTGACCAAACTCACATTCAAAAACTCACCTAC
TTGAGAATGGTGATCAAGGAAACTCTAAGACTTCATCCCCCGGGTCCTCTTTCATTTCCT
AGAGAATCGAGGGAGGAGTGCAAGATCAACGGGTATACGATACCAAATAAAACAGTAGTA
CTAGTGAATCTCTGGGCTATTGGAAGGGATCCAAAATACTGGGAAAATCCTGAAACATTT
GAGCCGGAGAGGTTTGAGTGCAGTCCAATTGATATAACTGGAACTCATTTTGAGTACACG
CCGTTTGGGGTGGGAAGGAGAATGTGTCCTGGTATGCCATTCGGAATGGCTGGCGTCGAA
GTCCCTCTCGCGCTATTACTTTACCATTTTGACTGGAAACTTCCTAATGGGATGAGTCCC
GAAGAGATAGACATGGCCGAAAAATTTAGCACTAGTCTTGAAAGAAAAAATGCGCTTTGT
TTGGTTCCTTCGCCTTACGTTGGGGCTACGTACTAG

Peptide Sequence

PEP ID

XP_016493154.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like isoform X2 [Nicotiana tabacum]
Sequence

MHLKLGQRLAVVVSSAEVVKELLSTHDLTFANRPQLLVGKIVWYDFSNIVFAQYGDFWRQ
MRKICNSELLGQRKIQSFFPMMFDEVSSLVMSIQEHDIGTPINLSKRLSLMQFAITCKAA
VGRTYSDQETLLMVMREVVTSADMFSPEDLFPSMKILQLIGGLKKKLTKMHQKADHVVEE
IIREHEIKRGTSVKPIEEDIVDVLLRLKESQDFPIPITRNNIKADMFVAGTTSTTTVTEW
ALSELVRNPRIMKKAQAEVKQVFKFGTERIDQTHIQKLTYLRMVIKETLRLHPPGPLSFP
RESREECKINGYTIPNKTVVLVNLWAIGRDPKYWENPETFEPERFECSPIDITGTHFEYT
PFGVGRRMCPGMPFGMAGVEVPLALLLYHFDWKLPNGMSPEEIDMAEKFSTSLERKNALC
LVPSPYVGATY

Transcript Sequence

Gene sequence data has not been registered.